Index of /~mcclean/plsc731/homework/papers

[ICO]NameLast modifiedSizeDescription
[DIR]Parent Directory  -
[ ]Association Mapping in Plants-lecture.pdf21-Apr-2010 11:37 289K
[ ]Gepts - crop domestication as a long-term selection experiment-study questions.pdf08-Jan-2008 09:44 11K
[ ]Lenser and Theissen - Molecular mechanisms involved in convergent crop domestication.pdf05-Jan-2022 16:39 3.1M
[ ]Meyer_et_al-patterns-and-processes-in-crop-domestication-an-historical-review-and-quantitative-analysis-of-2003-global-food-crops.pdf09-Jan-2018 10:04 1.9M
[ ]Transcription Factors lecture.pdf19-Apr-2004 15:15 91K
[ ]Ude et al - genetic diversity of soybean cultivars from china japan north america and north american ancestral lines determined by AFLP-study questions.pdf21-Feb-2012 20:07 7.2K
[ ]Yamamoto et al -Fine_mapping_of_quantitative_trait_loci_Hd1_Hd2_and Hd3 controlling heading date of rices as single Mendelian factors.pdf18-Mar-2020 13:17 330K
[ ]Zhao et al. GWAS reveals a rich genetic architecture of complex traits in Oryza sativa.pdf27-Mar-2012 12:25 21K
[ ]agrama et al - association mapping of yield and its components in rice cultivars-paper notes.pdf14-Apr-2008 10:35 17K
[ ]agrama et al - association mapping of yield and its components in rice cultivars.pdf07-Nov-2007 13:55 582K
[ ]aguade-fah1-and-f3h-variation.pdf19-Feb-2006 13:03 110K
[ ]aguade - nucleotide sequence variation at two genes of the phenylpropanoid pathway the FAH1 and F3H genes in Arabidopsis thalaiana-study questions.pdf21-Feb-2008 10:36 12K
[ ]aguade - nucleotide sequence variation at two genes of the phenylpropanoid pathway the FAH1 and F3H gen in Arabidopsis thaliana.pdf19-Feb-2006 12:55 110K
[ ]alonso-blanco et al - analysis of natural allelic variation at flowering time loci in the Landsberg erecta and Cape Verde Islands ecotyps of Arabidopsis thaliana.pdf16-Mar-2004 07:52 392K
[ ]alpert and tanksley - high-resolution mapping and isolation of a yeast artificial chromosome contig containing fw2.2 - a major fruit weight quantitative trait locus in tomato.pdf20-Mar-2020 18:20 283K
[ ]aranzana et al - genome-wide association mapping in Arabidopsis identifies previously known flowering time and pathogen resistance genes.pdf07-Feb-2006 14:55 2.4M
[ ]badr et al - on the origin and domestication history of barley - hordeum vulgare.pdf09-Jan-2006 15:14 525K
[ ]beavis - the power and deceit of qtl experiments - lessons from comparative qtl studies.pdf17-Mar-2006 19:47 1.8M
[ ]bennetzen - transposable element contribution to plant gene and genome evolution.pdf03-Mar-2004 15:46 157K
[ ]bertioli et al - a large scale analysis of resistance gene homologues in Arachis.pdf18-Feb-2004 15:47 390K
[ ]brachi et al - linkage and association mapping of Arabidopsis thaliana flowering time in nature.pdf16-Mar-2012 09:36 6.8M
[ ]buckler et al - molecular diversity structure and domestication of grasses.pdf06-Mar-2002 15:09 173K
[ ]buckler et al - molecular diverstiy structure and domestication of grasses-study questions.pdf08-Jan-2008 09:53 11K
[ ]burr et al - gene mapping with recombinant inbreds in maize.pdf12-Jan-2004 13:08 1.5M
[ ]buschges et al - the barley mlo gene - a novel control element of plant pathogen resistance.pdf12-Apr-2006 12:07 2.1M
[ ]cabrera - et al - development and bin mapping of a Rosaceae conserved ortholog set - COS - of markers.pdf24-Feb-2010 10:38 1.3M
[ ]churchill and doerge - empirical threshold values for quantiative trait mapping.pdf15-Mar-2004 09:20 1.6M
[ ]clarke et al - QTL analysis of flowering time in Arabidopsis thaliana-study questions.pdf31-Mar-2008 07:54 11K
[ ]clarke et al - qtl analysis of flowering time in Arabidopsis thaliana.pdf17-Mar-2006 19:38 1.4M
[ ]cockram et al - association mapping of partitioning loci in barley.pdf28-Apr-2008 12:56 1.7M
[ ]cook et al - genetic architecture of maize kernel composition in the nested association mapping and inbred association panels.pdf30-Apr-2012 17:56 1.0M
[ ]coulibaly et al - aflp analysis of the phenetic organization and genetic diversity of vigna unguiculata L. Walp. reveals extensive gene flow between wild and domesticated types.pdf13-Feb-2004 10:06 132K
[ ]cummings and clegg - nucleotide sequence diversity at the alchohol dehydrogenase 1 locus in wild barley-study questions.pdf21-Feb-2008 10:37 11K
[ ]cummings and clegg - nucleotide sequence diversity at the alcohol dehydrogenase 1 locus in wild barley - hordeum vulgare ssp spontaneum - an evaluation of the background selection hypothesis.pdf18-Feb-2004 16:06 182K
[ ]doebley - the genetics of maize evolution.pdf30-Mar-2006 09:49 645K
[DIR]doebley/24-Nov-2009 07:12 -
[ ]doebley et al - Genetic and morphological analysis of a maize-teosinte F2 population - implications for the origin of maize.pdf31-Mar-2006 11:05 1.2M
[ ]doerge - mapping and analysis of quantitative trait loci in experimental populations.pdf29-Aug-2002 15:09 584K
[ ]edwards et al - molecular-marker-facilitated investigagtions of quantitative-trait loci in maize - numbers, genomic distribution and types of gene action.pdf17-Mar-2006 14:06 1.4M
[ ]ehrenreich et al - candidate gene association mapping of Arabidopsis flowering time.pdf24-Apr-2010 08:19 2.1M
[ ]el-assal et al - a qtl for flowering time in Arabidopsis reveals a novel allele of cry2.pdf16-Mar-2004 07:03 1.3M
[ ]ellis-et-al-mendel-150-years-on.pdf10-Jan-2012 10:02 566K
[ ]exam1-2010.pdf24-Feb-2010 13:29 13K
[ ]exam1-2012.pdf16-Mar-2012 16:56 8.6K
[ ]exam1-2014.pdf27-Mar-2014 15:45 14K
[ ]exam1-2016.pdf17-Mar-2016 09:17 16K
[ ]exam1-paper-2006.pdf01-Mar-2006 15:59 269K
[ ]exam1-paper.pdf25-Feb-2004 10:25 456K
[ ]exam1-paper1-2008.pdf20-Mar-2008 08:01 394K
[ ]exam1-paper2-2008.pdf20-Mar-2008 08:03 500K
[ ]exam2-2008.pdf28-Apr-2008 14:07 19K
[ ]exam2-2010.pdf25-Apr-2010 09:12 9.7K
[ ]exam2-2016.pdf04-May-2016 08:33 14K
[ ]frary et al - fw2.2 - a quantitative trait locus key to the evolution of tomato fruit size.pdf16-Mar-2004 07:21 272K
[ ]gale and devos - plant comparative genetics after 10 years.pdf13-Jan-2004 08:06 417K
[ ]gepts - crop domestication as a long-term selectioin experiment.pdf09-Jan-2006 13:55 2.1M
[ ]gujaria et al - development and use fo genic molecular markers for construction of a transcript mapof chickpea.pdf16-Mar-2012 15:48 502K
[ ]gupta - linkag disequilibrium and associatin studies in higher plants - present status and future prospects.pdf24-Apr-2006 14:10 479K
[ ]hall et al - beyond the arabidopsis genome - opportunities for comparative genomics.pdf20-Dec-2003 09:53 644K
[ ]hao et al - Characterization of a major QTL for adult plant resistance to stripe rust in US soft red winter wheat.pdf16-Mar-2012 15:19 736K
[ ]hu and vick - target region amplification polymorphism - a novel marker technique for plant genotyping.pdf17-Dec-2003 18:22 380K
[ ]huen et al - site of einkorn wheat domestication identified by DNA fingerprinting.pdf12-Jan-2004 20:26 383K
[ ]hunt et al - genetic diversity and phylogeography of broomcorn millet across Eurasia.pdf16-Mar-2012 15:44 675K
[ ]jaenicke-despres et al - early allelic selection in maize as revealed by ancient DNA.pdf05-May-2004 07:20 152K
[ ]jakoby et al - bZIP transcription factors in Arabidopsis.pdf05-May-2004 07:08 203K
[ ]jander - arabidopsis map-based cloning in the post-genome era.pdf17-Aug-2003 13:46 205K
[ ]jones et al - markers and mapping - we are all geneticists now-study questions.pdf28-Jan-2008 10:46 12K
[ ]jones et al - markers and mapping-we are all geneticts now.pdf18-Nov-2003 10:12 439K
[ ]kalendar et al - Analysis of plant diversity with retrotransposon-based molecular markers.pdf16-Mar-2012 15:29 887K
[ ]kawabe and miyashita - dna variation in the basic chitinase locus - chib - reigon of the wild plant arabidopsis thaliana.pdf17-Mar-2004 12:24 202K
[ ]kawabe et al - nucleotide polymorphism in the acidic chitinase locus - chiA - region of the wild plant arabidopsis thaliana.pdf17-Mar-2004 12:36 1.7M
[ ]kearsey - the principle of QTL analysis - a minimal mathematics approach.pdf23-Mar-2004 09:18 107K
[ ]kearsey and farquhar - qtl analysis in plants - where are we now.pdf22-Mar-2004 20:48 745K
[ ]keim et al - evaluation of soybean RFLP diversity in adapted germplasm-study questions.pdf21-Feb-2008 10:27 12K
[ ]keim et al - evaluation of soybean RFLP marker diversity in adapted germ plasm.pdf13-Feb-2006 15:55 1.3M
[ ]kojima et al - hd3a a rice ortholog of the arabidopsis FT gene promotes transition to flowering downstream of hd1 under short day conditions.pdf16-Mar-2004 07:16 872K
[ ]kosman and leonard - similarity coefficients for molecular markers in studies of genetic relationships between individuals for haploid diploid and polyploid species.pdf26-Feb-2008 13:33 141K
[ ]kovach et al. - new insights into the history of rice domestication.pdf24-Feb-2010 13:11 823K
[ ]ku et al - the genetic basis of pear-shaped tomato fruit.pdf16-Mar-2004 08:17 187K
[ ]kuittinen and aquade - nucleotide variation at the chalcone isomerase locus in Arabidopsis thaliana.pdf17-Mar-2004 12:07 174K
[ ]lemon and tijan - orchestrated response- a symphony of transcriptional factors for gene control.pdf10-Dec-2003 11:08 4.3M
[ ]levin and tijan - transcription regulatioin and animal diversity.pdf16-Oct-2003 09:46 332K
[ ]li-et-el-genome-wide-association-study-dissects-the-genetic-architecture-of-oil-biosynthesis-in-maize.pdf12-Apr-2016 09:46 642K
[ ]li and quiros - sequence-related amplified polymorphism (SRAP), a new marker system based on a simple PCR reaction - its application to mapping and gene tagging in Brassica.pdf29-Jan-2004 13:04 172K
[ ]li et al - genetic structure and diversity of cultivated soybean - Glycine max L - landraces in China.pdf04-Feb-2010 17:12 729K
[ ]li et al - genetic structure and diversity of cultivated soybean landraces in China-study questions.pdf06-Feb-2010 20:30 10K
[ ]li et al - rice domestication by reducing shattering+supplemental material.pdf01-May-2006 09:20 364K
[ ]li et al - rice domestication by reducing shattering - supplemental materials.pdf01-May-2006 09:17 56K
[ ]li et al - rice domestication by reducing shattering.pdf01-May-2006 09:11 312K
[ ]lipka-et-al-genome-wide-association-study-and-pathway-level-analysis-of-tocochromanol-levels-in-maize-grain.pdf12-Apr-2016 09:51 1.4M
[ ]liu et al - a new class of regulatory genes underlying the casue of pear-shaped tomato fruit.pdf16-Mar-2004 07:20 356K
[ ]lukowitz et al - positional cloning in arabidopsis - why it feels good to have a genome initiative working for you.pdf18-Mar-2004 11:51 333K
[ ]ma-et--al-new-powdery-mildew-resistance-in wheat.pdf10-Mar-2016 09:06 476K
[ ]mapmaker-reference.pdf07-Feb-2006 15:29 2.4M
[ ]martin et al - map-based cloning of a protein kinase gene conferring disease resistance in tomato.pdf12-Apr-2006 12:20 1.3M
[ ]martin et al - understanding the functions of plant disease resistance proteins.pdf05-May-2004 07:17 306K
[ ]matsuoka et al - a single domestication for maize shown by multilocus microsatellite genotyping-study questions.pdf08-Jan-2008 09:53 11K
[ ]matsuoka et al - a single domestication for maize shown by multilocus microsatellite genotyping.pdf07-Apr-2004 11:01 397K
[ ]mauricio - mapping quantitative trait loci in plants - uses and caveats for evolutionary biology.pdf05-Mar-2004 11:28 1.4M
[ ]mcdowell and woffenden - plant disease resistance genes - recent insights and potential applications.pdf18-Mar-2004 13:48 1.6M
[ ]meyer-and-purugganan-evolution-of-crop-species-genetics-domestication-and-diversification.pdf09-Jan-2018 09:54 3.5M
[ ]meyer-purugganan domestication paper questions for studying.pdf25-Jan-2018 10:04 39K
[ ]michelmore et al - identification of markers linked to disease-resistance genes by bulked segregant analysis - a rapid method to detect markers in specific genome regions by using segregating populations.pdf12-Jan-2004 16:33 1.5M
[ ]miyashita et al - intra- and interspecific variation of the alcohol dehydrogenase locus region in wild plants arabis gemmifera and arabidopsis thaliana.pdf17-Mar-2004 12:39 502K
[ ]mohammadi and prasanna - analysis of genetic diversity in crop plants - salient statistical tools and considerations.pdf17-Mar-2005 15:10 109K
[ ]nicolai-origin-of-peppers.pdf27-Mar-2014 14:21 1.1M
[ ]nimchuk et al - recognition and response in the plant immune system.pdf18-Mar-2004 13:41 280K
[ ]nordborg and weigel - next generation genetics in plants.pdf30-Sep-2009 18:03 1.1M
[ ]osborn - comparison of flowering time genes in Brassica rapa B napus and Arabidopsis thaliana.pdf17-Mar-2006 12:42 3.7M
[ ]osborn et al - comparison of flowering time genes inBrassica rapa, B. napus and Arabidopsis thaliana-study questions.pdf31-Mar-2008 07:57 10K
[ ]ozkan et al - a reconsideration of the domestication geography of tetraploid wheat-study questions.pdf08-Jan-2008 09:53 11K
[ ]ozkan et al - a reconsideration of the domestication geography of tetraploid wheats.pdf09-Jan-2006 13:43 340K
[ ]paran and zamir - quantitative traits in plants - beyond the QTL.pdf07-Aug-2003 18:38 88K
[ ]parker et al - phenotypic characterization and molecular mapping of the Arabidopsis thaliana locus RPP5.pdf13-Apr-2006 08:41 1.5M
[ ]parker et al - the arabidopsis downy mildew resistance gene RPP% shares similarity to the Toll and Interleukin-1 receptors with N and L6.pdf12-Apr-2006 12:16 2.8M
[ ]parker et al - the arabidopsis downy mildew resistance gene RPP5 shares similarity to the toll and interleukin-1 receptors with N and L6.pdf05-Apr-2004 19:05 2.8M
[ ]parkin et al - segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana-study questions.pdf06-Feb-2010 20:58 9.3K
[ ]parkin et al - segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana.pdf31-Dec-2007 10:24 1.8M
[ ]paterson et al - resolution of quantitative traits into Mendelian factors by using a complete linkage map of restriciton fragment length polymorphisms.pdf17-Mar-2006 13:01 611K
[ ]pearce et al - pea ty1-copia group retrotransposons-transpositional activity and use as markers to study genetic diversity in Pisum.pdf03-Mar-2004 19:34 234K
[ ]pirra et al - genetic diversity in a soybean collection.pdf24-Feb-2010 10:02 618K
[ ]plant_genome_sequencing_papers.pdf02-Mar-2010 10:17 6.6M
[ ]purugganan and suddith - molecular population genetics of floral homeotic loci - departures from the equilibrium-neutral model a the apetala3 and pistillata genes of arabidopsis thalians.pdf17-Mar-2004 12:26 152K
[ ]purugganan and suddith - molecular population genetics of the arabidopsis cauliflower regulatory gene - nonneutral evolution and naturally occurring variation in floral homeotic functioin.pdf17-Mar-2004 12:31 267K
[ ]queen et al - retrotransposon-base molecular markers for linkage and genetic diversity in wheat.pdf03-Mar-2004 19:41 755K
[ ]reid-and-ross-mendels-genes-toward-a-full-molelcular-characterization.pdf09-Jan-2012 15:45 495K
[ ]reid and ross - mendels genes paper questions.pdf23-Jan-2012 14:57 12K
[ ]reiter et al - global and local genome mapping in Arabidopsis thaliana by using recombinant inbred lines and random amplified polymorphic dnas.pdf15-Apr-2004 11:48 1.1M
[ ]rivkin et al. - disease-resistance related sequences in common bean.pdf15-Dec-2003 11:26 302K
[ ]saidou et al - association studies identify natural variation at PHYC linked to flowering time and morphological variatin in pearl millet.pdf20-Apr-2010 08:26 1.4M
[ ]salamini et al - genetics and geography of wild cereal domestication in the near east - study questions.pdf08-Jan-2008 09:46 11K
[ ]salamini et al - genetics and geography of wild cereal domestication in the near east.pdf09-Jan-2006 14:41 1.5M
[ ]salvi and tuberosa - to clone or not to clone plant QTLs - present and future challenges.pdf24-Apr-2006 14:19 158K
[ ]sax - the association of size differences with seed-coat pattern and pigmentation in phasolus vulgaris.pdf05-Mar-2004 11:31 613K
[ ]sequence diversity homework.pdf24-Mar-2006 08:24 36K
[ ]soltis and soltis - the role of phylogenetics in comparative genetics.pdf20-Dec-2003 09:47 281K
[ ]stanton-geddes-et al - candidate genes and genetic architecture of symbiotic and agronomic traits revealed by whole-genome sequence based association genetics in Medicago truncatula.PDF14-Apr-2016 08:49 338K
[ ]szalma et al - association analysis of candidtate genes for maysin and chlorogenic acid accumulation in maize silks.pdf18-Jul-2005 09:32 353K
[ ]takahashi et al - hd6 a rice quantiative trait locus involved in photoperiod sensitivity encodes the alpha subunit of protein kinase ck2.pdf16-Mar-2004 07:13 177K
[ ]takano-kai et al - evolutionary history of GS3 a gene conferring grain length in rice.pdf24-Apr-2010 07:17 2.0M
[ ]tanksley et al - high density molecular linkage maps of the tomato and potato genomes-study questions.pdf28-Jan-2008 10:46 9.9K
[ ]tanksley et al - high density molecular linkage maps of the tomato and potato genomes.pdf12-Jan-2004 13:10 4.3M
[ ]tessier et al - optimization of the choice of molecular markers for varietal identification in Vitis vinifer L.pdf07-Feb-2002 10:14 111K
[ ]thornsberry et al - dwarf8 polymorphisms associate with variation in flowering time.pdf19-Mar-2002 14:21 1.0M
[ ]toledo-ortiz et al - the arabidopsis basic-helix-loop-helix transcription factor family.pdf05-May-2004 07:14 1.2M
[ ]tommasini et al - association mapping of Stagnospora nodorum blotch resistance in modern European winter wheat varieties - paper notes.pdf14-Apr-2008 13:26 15K
[ ]tommasini et al - association mapping of Stagonospora nodorum blotch resistance in modern European winter wheat varieties-manuscript+supplements.pdf10-Nov-2007 09:44 410K
[ ]ude et al - genetic diversity of soybean cultivars from china japan north america and north american ancestral lines determined byAFLP.pdf13-Feb-2004 10:02 141K
[ ]vallad et al - cloninig and homology modelliing of a Pto-like protein kinase family of common bean - Phaseolus vulgaris L.pdf18-May-2006 13:33 794K
[ ]vallejos et al - a molecular marker-based linkage map of Phaseolus vulgaris-study questions.pdf28-Jan-2008 10:46 12K
[ ]vallejos et al - a molecular marker-based linkage map of Phaseolus vulgaris L.pdf12-Jan-2004 13:18 1.9M
[ ]varshney-drought-tolerance-in-chickpea.pdf27-Mar-2014 14:29 1.2M
[ ]wang et al - GWAS in barley study notes.pdf21-Mar-2012 15:11 80K
[ ]wang et al - genome-wide associationi mapping of agronomic and morphologic traits in highly structured populations of barley cultivars.pdf16-Mar-2012 08:57 518K
[ ]waugh et al - genetic distribution of bare-1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms-S-SAP.pdf03-Mar-2004 19:39 712K
[ ]weber et al - the genetic architecture of complex traits in teosinte - new evidence from association mapping.pdf20-Apr-2010 08:30 521K
[ ]whitkus et al - comparative genome mapping of sorghum and maize-study questions.pdf21-Feb-2008 10:26 11K
[ ]whitkus et al - comparative genome mapping of sorghum and maize.pdf13-Feb-2006 15:57 1.0M
[ ]whitt et al - genetic diversity and selection in the maize starch pathway-study questions.pdf21-Feb-2008 10:38 10K
[ ]whitt et al - genetic diversity and selection in the maize starch pathway.pdf17-Feb-2004 10:27 137K
[ ]wray et al - the evolution of transcriptional regulation in eukaryotes.pdf09-Dec-2003 20:35 724K
[ ]xing and zhang - genetic and molecular bases of rice yield.pdf24-Apr-2010 07:56 1.3M
[ ]xing et al - fine mapping of a major quantitative trait loci, qSSP7, controlling the number of spikelets per panicle as a single Mendelian factor in rice.pdf28-Apr-2008 12:02 412K
[ ]yan et al - association mapping for enhancing maize - zea mays L - genetic improvement.pdf16-Mar-2012 08:49 1.3M
[ ]yan et al - positional cloning of the wheat vernalization gene VRN1.pdf05-Apr-2004 19:24 303K
[ ]yan et al - the wheat vrn2 gene is a flowering repressor down-regulated by vernalization.pdf05-Apr-2004 19:23 406K
[ ]yano et al - hd1 a major photoperiod sensitivity quantitative trait locus in rice is closely related to the arabidopsis flowering time gene constans.pdf16-Mar-2004 07:08 184K
[ ]yu and buckler - genetic association mapping and genome organization of maize.pdf24-Apr-2006 14:30 204K
[ ]zhang-et-al-watermelon-diversity.pdf07-Mar-2016 13:03 715K
[ ]zhao et al - genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa.pdf16-Mar-2012 10:35 1.7M
[ ]zhu et al - status and prospects of association mapping in plants.pdf20-Apr-2010 08:21 1.6M
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